
Publications & Software
Publications
*Indicates undergraduate student mentee
2026
Bock, B.M., Van Bramer, D., & Peterson, R. Environmental Footprint Reporting as a Performance Metric in Environmental Data Science. In review at Environmental Data Science. Preprint
Bock, B.M., McKay, N.P., Johnson, N.C., & Gehring, C.A. Mapping the geographic, taxonomic, and socioeconomic biases of global fungal endophyte research. Revise and resubmit at New Phytologist. Preprint & Zenodo Repository
Bock, B., Schaefer, E.A., & Gehring, C.A. (In coauthor review). Mycorrhizal colonization extracts significant growth costs but enhances drought survival in cottonwood hybrids through physiological compensation.
Bock, B.M., Kimball-Rhines, C., Sarkar, M., & Zahn, G. Graph neural networks reveal transferable structure for predicting community coalescence. In preparation for Nature Communications.
Bock, B.M., Sikes, B.A., & Antunes, P.M. Mycorrhizal Pathology: A Definitional and Evidentiary Framework for Identifying Pathogens of Mycorrhizal Fungi. In preparation for New Phytologist (invited Community Resources contribution).
Waschk, P., Spiegel, P., Gessler, A., Saurer, M., Bock, B.M., Hinterdobler, W., & Anthony, M.A. (2026). Evidence for resource transfer via common endophyte networks. Scientific Reports. DOI
Bock, B. (2026). Automated Extraction of Fungal Trophic Modes from Literature Using BioBERT: An Open Pilot Workflow. Research Ideas and Outcomes. DOI & Zenodo Repository & Press Release in Eurekalert & Press Release in NAU Review
2025
Bock, B., Scherer, J., Parrish, F.*, Burnside, J.*, Rohrer, C.*, & Gehring, C. (2025). A simple protocol for producing axenic seeds of Sorghum bicolor. MicroPublications Biology. DOI
Bock, B.M., Hoeksema, J.D., Johnson, N.C., & Gehring, C.A. (2025). Evidence for common fungal networks among plants formed by a Dark Septate Endophyte in Sorghum bicolor. Communications Biology. DOI (Featured in Interview with Dr. César Marín and in IMS Newsletter, Nov 2025)
Vietorisz, C., Nash, J., Siggers, J., Leander, E., Bock, B., Camuy-Vélez, L., Hall, A.J., Jaros, J., Kuehn, K., Lai, E., Mounts, I., Bacy, I., Dagg, C., Anderson, I., Carnegie, A., Powell, J., Brewer, S., D'Antonio, C., Hynson, N., Vilgalys, R., & Hoeksema, J. (2025). Pine-fungal co-invasion alters whole-ecosystem properties of a native eucalypt forest. New Phytologist. DOI
Seeley, M. M., Wiebe, B. C., Gehring, C. A., Hultine, K. R., Posch, B. C., Cooper, H. F., Schaefer, E., Bock, B., Abraham, A. J., Moran, E. M., Keith, A., Allan, G. J., Scull, M., Whitham, T. G., Martin, R. M., Asner, G. P., & Doughty, C. E. (2025). Remote sensing reveals inter- and intraspecific variation in riparian cottonwood (Populus spp.) response to drought. Journal of Ecology. DOI
Bock, B., Curry, L.*, & Gehring, C. (2025). Better utilization of inorganic nitrogen compared to organic nitrogen by a plant symbiotic fungal isolate of Alternaria alternata. microPublication Biology. DOI
Rillig, M. C., Lehmann, A., Mounts, I. R., & Bock, B. M. (2025). Concurrent common fungal networks formed by different guilds of fungi. New Phytologist. DOI (Selected as a Top 10 Mycorrhizal Research Paper, IMS Newsletter, Nov 2025)
Before 2025
Bock, B., & Markovchick, L. (2023). Considering Soil Biota and Symbioses in Forest Management and Ecosystem Restoration. Forests, 14(6), 1236. DOI
Bock, B.M., Darroch, S. A. F., & Casey, M. (2023). Long-term changes in unionid community in Kentucky Lake: Implications for understanding the effects of impoundment on river systems. Journal of Freshwater Ecology, 38(1), 2203712. DOI
Sperling, E. A., Melchin, M. J., Fraser, T., Stockey, R. G., Farrell, U. C., Bhajan, L., Brunoir, T. N., Cole, D. B., Gill, B. C., Lenz, A., Loydell, D. K., Malinowski, J., Miller, A. J., Plaza-Torres, S., Bock, B., Rooney, A. D., Tecklenburg, S. A., Vogel, J. M., Planavsky, N. J., & Strauss, J. V. (2021). A long-term record of early to mid-Paleozoic marine redox change. Science Advances, 7(28), eabf4382. DOI
*Indicates undergraduate student mentee
Software
CodeCarbonR: Track Energy Consumption and Carbon Emissions of R Code. R package (CRAN v0.1.0, 2026). Creator and maintainer, developed with D. Van Bramer and R. Peterson. Wraps the Python codecarbon package via reticulate to bring energy and carbon emissions tracking to R workflows. CRAN & GitHub
nanodRop: Tools for Importing and Processing NanoDrop One Spectral Data. R package (v0.0.0.9000, 2024). Creator and maintainer. Facilitates reproducible import and analysis of NanoDrop One spectrophotometer spectral data. Zenodo & Documentation